The services provided by UBC Advanced Research Computing (ARC) have supported published work for UBC researchers across all disciplines. Many researchers have acknowledged UBC ARC in their publications. This page is dedicated to sharing these publications and highlighting the work of UBC researchers.
Citing UBC ARC is also important in enabling us to continue supporting the UBC researcher community. If the services provided by UBC ARC have been useful in your research, please include the following acknowledgement:
“This research was supported in part through computational resources and services provided by Advanced Research Computing at the University of British Columbia.”
This webpage does not represent an exhaustive list of publications that were supported by UBC ARC services. We would be happy to add your research publication to our list. Also, if you would like us to feature your research on this page, you may include a brief summary of the publication(s) you want to feature, and we will put it in our queue. Submit your information using our intake form.
List of Publications by Year
2024
- Bicheng Xu et al. 'Joint Generative Modeling of Scene Graphs and Images via Diffusion Models' arXiv 2024
- Samuel N.M. Brown et al. 'Understanding the origin of microcompressions in cellulose fibres using 4D X-ray micro-computed tomography' Cellulose 2024
- Matthew Niedoba et al. 'Nearest Neighbour Score Estimators for Diffusion Generative Models' arXiv 2024
- William Casazza et al. 'Sex-dependent placental methylation quantitative trait loci provide insight into the prenatal origins of childhood onset traits and conditions' iScience 2024
- Xiaoyu Mao and Rajeev Jaiman 'A 3D phase-field based Eulerian variational framework for multiphase fluid-structure interaction with contact dynamics' arXiv 2024
- Sebastiano Stipa, Dries Allaerts, and Joshua Brinkerhoff ' A Shear Stress Parametrization for Arbitrary Wind Farms in Conventionally Neutral Boundary Layers' Journal of Fluid Mechanics 2024
- Ruiyang Ge et al. 'Normative modelling of brain morphometry across the lifespan with CentileBrain: algorithm benchmarking and model optimisation' The Lancet Digital Health 2024
- Ali Salehi, Ming Yang, and Mahdi Taiebat 'Effect of Inherent Fabric on Cyclic Resistance of Granular Materials with Static Shear: A 3D-DEM Study' Geo-Congress 2024 2024
- Xiaoya Su et al. 'Control of the Colloidal and Adsorption Behaviors of Chitin Nanocrystals and an Oppositely Charged Surfactant at Solid, Liquid, and Gas Interfaces' Langmuir 2024
- Jeremy Heyl et al. 'Complex rotational dynamics of the neutron star in Hercules X-1 revealed by X-ray polarization' Nature Astronomy 2024
- B.D. Linh et al. 'Onset of collectivity for argon isotopes close to N = 32' Physical Review C 2024
- Karyn D. Suchy, Susan E. Allen, Elise Marie Black Olson 'Mechanistic Links Between Climatic Forcing and Model-based Plankton Dynamics in the Strait of Georgia, Canada' ESS Open Archive 2024
- Shawn C.C. Hsueh et al. 'Cyclization Scaffolding for Improved Vaccine Immunogen Stability: Application to Tau Protein in Alzheimer’s Disease' Journal of Chemical Information and Modeling 2024
- Greg d'Eon, Neil Newman, and Kevin Leyton-Brown 'Understanding Iterative Combinatorial Auction Designs via Multi-Agent Reinforcement Learning' arXiv 2024
- Ishika Luthra et al. 'Regulatory activity is the default DNA state in eukaryotes' Nature Structural & Molecular Biology 2024
- Pranav Garg, Shawn C.C. Hsueh, and Steven S. Plotkin 'Testing the feasibility of targeting a conserved region on the S2 domain of the SARS-CoV-2 spike protein' Biophysical Journal 2024
- Jaidev Gill et al. 'Engineering the Neural Collapse Geometry of Supervised-Contrastive Loss (Student Abstract)' AAAI Conference on Artificial Intelligence 2024
- Hamad Abdel Hadi et al. 'Epidemiology, Clinical, and Microbiological Characteristics of Multidrug-Resistant Gram-Negative Bacteremia in Qatar ' Antibiotics 2024
- Biswajeet Rath, Xiaoyu Mao, and Rajeev Jaiman 'A Review of Interface-Driven Adaptivity for Phase-Field Modeling of Fluid–Structure Interaction' Journal of the Indian Institute of Science 2024
- Wei-Rui Chen, Ife Adebara, and Muhammad Abdul-Mageed 'Interplay of Machine Translation, Diacritics, and Diacritization' arXiv 2024
- Manuel Gloeckler et al. 'All-in-one simulation-based inference' arXiv 2024
- Wael Goravey et al. 'Clinical, phenotypic, and genotypic characteristics of ESBL-producing Salmonella enterica bloodstream infections from Qatar' IJID Regions 2024
- Mohsen Azimi and Tony T.Y. Yang 'Transformer‐based framework for accurate segmentation of high‐resolution images in structural health monitoring' Computer-Aided Civil and Infrastructure Engineering 2024
- Takeharu Yoshii et al. 'Quantitative and qualitative analysis of nitrogen species in carbon at the ppm level' Chem 2024
- Sebastiano Stipa 'Development of High and Low Fidelity Models for Wind Farm - Atmospheric Boundary Layer Interaction' University of British Columbia 2024
- Aashish Goyal et al. 'Flow past a random array of statistically homogeneously distributed stationary Platonic polyhedrons: Data analysis, Probability maps and Deep Learning models' International Journal of Multiphase Flow 2024
- Zhi Cheng et al. 'Modeling Of Hydroacoustic Noise From Marine Propellers With Tip Vortex Cavitation' International Conference on Ocean, Offshore & Arctic Engineering 2024
- Debashish Mukherji 'Computing the thermal transport coefficient of neutral amorphous polymers using exact vibrational density of states: Comparison with experiments' arXiv 2024
- Jie JW Wu and Fatemeh H. Fard 'Benchmarking the Communication Competence of Code Generation for LLMs and LLM Agent' arXiv 2024
- Saeid Naderiparizi et al. 'On Neural Process Pooling Operator Choice and Posterior Calibration' Canadian Conference on Artificial Intelligence 2024
- Daniel Rebain, Soroosh Yazdani, Kwang Moo Yi, and Andrea Tagliasacchi 'Neural Fields as Distributions: Signal Processing Beyond Euclidean Space' Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition 2024
- Mohamad Amin Mahamadi et al. 'Why Do You Grok? A Theoretical Analysis on Grokking Modular Addition' International Conference on Machine Learning 2024
- Xue Yu, Muchen Li, Yan Leng, and Renjie Liao 'Learning Latent Structures in Network Games via Data-Dependent Gated-Prior Graph Variational Autoencoders' International Conference on Machine Learning 2024
- Rui Gao, Shayan Heydari, and Rajeev K. Jaiman 'Towards spatio-temporal prediction of cavitating fluid flow with graph neural networks' International Journal of Multiphase Flow 2024
- Ahmad Rahmzadeh and M. Shahria Alam 'Feasibility of using superelastic shape memory alloy in plastic hinge regions of steel bridge columns for seismic applications' Earthquake Engineering & Structural Dynamics 2024
- Musanna Galib, Okan Orhan, Jian Liu, and Mauricio Ponga 'Residual Stress Development in Lattice Mismatched Epitaxial Thin Films via Atomic and Molecular Layer Depositions' arXiv 2024
- Yuecheng Cai and Jasmin Jelovica 'Graph Neural Network for Stress Predictions in Stiffened Panels' Pomorski zbornik 2024
- Takeharu Yoshii et al. 'Quantitative and qualitative analysis of nitrogen species in carbon at the ppm level' Chem 2024
- Rui Gao and Rajeev K. Jaiman 'Predicting fluid–structure interaction with graph neural networks' Physics of Fluids 2024
- Clément Soubrier et al. 'Optimal control of ribosome population for gene expression under periodic nutrient intake' arXiv 2024
- Yue Wang et al. 'Population genomic analyses reveal high diversity, recombination and nosocomial transmission among Candida glabrata (Nakaseomyces glabrata) isolates causing invasive infections' Microbial Genomics 2024
- Qiucen Li et al. 'APDF: An active preference-based deep forest expert system for overall survival prediction in gastric cancer' Expert Systems with Applications 2024
- Sebastiano Stipa et al. 'An LES Model for Wind Farm-Induced Atmospheric Gravity Wave Effects Inside Conventionally Neutral Boundary Layers' Wind Energy Science Discussions 2024
- Utkan Çalışkan and Sanja Mišković 'Analysis of particle dispersion and cavity formation during bulk particle water entry using fully coupled CFD-DEM-VOF approach' Particuology 2024
2023
- Naitong Chen and Trevor Campbell. 'Coreset Markov chain Monte Carlo' arXiv 2023
- Abdelrahman Mohamed et al. 'Violet: A Vision-Language Model for Arabic Image Captioning with Gemini Decoder' arXiv 2023
- Michael A. Skinnider et al. 'Identification of Emerging Novel Psychoactive Substances by Retrospective Analysis of Population-Scale Mass Spectrometry Data Sets' Analytical Chemistry 2023
- Gopal Sharma et al. 'Volumetric Rendering with Baked Quadrature Fields' arXiv 2023
- Abdelrahim Elmadany, Ahmed El-Shangiti, and Muhammad Abdul-Mageed 'Dolphin: A Challenging and Diverse Benchmark for Arabic NLG' Findings of the Association for Computational Linguistics 2023
- Xun Niu et al. 'Structured Emulgels by Interfacial Assembly of Terpenes and Nanochitin' ACS Nano 2023
- Raghav Goyal et al. 'M3T: Multi-Scale Memory Matching for Video Object Segmentation and Tracking' arXiv 2023
- Shweta Mahajan et al. 'Prompting Hard or Hardly Prompting: Prompt Inversion for Text-to-Image Diffusion Models' arXiv 2023
- Qiaoyue Tang, Frederick Shpilevskiy, and Mathias Lécuyer. 'DP-AdamBC: Your DP-Adam Is Actually DP-SGD (Unless You Apply Bias Correction)' arXiv 2023
- Erik Frieling et al. 'Cross-calibration of atomic sensors for pressure metrology' arXiv 2023
- Sicen Yu et al. 'Damage-Tolerant Wood Layers for Corrosion Protection of Metal Structures' Nano Letters 2023
- Michael A. Skinnider, Mopelola O. Akinlaja, and Leonard J. Foster 'Mapping protein states and interactions across the tree of life with co-fractionation mass spectrometry' Nature Communications 2023
- Hubert Courteau-Godmaire 'A Cosserat approach to modelling the deformation mechanisms of uncured composites during processing' University of British Columbia (2023)
- Yuecheng Cai and Jasmin Jelovica 'Graph Neural Network for Stress Predictions in Stiffened Panels Under Uniform Loading' arXiv (2023)
- Ramezankhani, Milad, et al. 'Smart manufacturing under limited and heterogeneous data: a sim-to-real transfer learning with convolutional variational autoencoder in thermoforming' International Journal of Computer Integrated Manufacturing (2023)
- Taotao Meng, et al. 'MOF-Derived nanoarchitectured carbons in wood sponge enable solar-driven pumping for high-efficiency soil water extraction' Chemical Engineering Journal (2023)
- Suraj R. Kashyap, Rajeev K. Jaiman 'Unsteady cavitation dynamics and frequency lock-in of a freely vibrating hydrofoil at high Reynolds number' International Journal of Multiphase Flow (2023)
- Yongwei Wang, et al. 'Ssd-kd: A self-supervised diverse knowledge distillation method for lightweight skin lesion classification using dermoscopic images' Medical Image Analysis (2023)
- David N. Stephens, et al. 'Catalytic Ammonia Oxidation to Dinitrogen by a Nickel Complex' Angewandte Chemie (2023)
- Alberto Nocera, Mona Berciu 'Electron addition spectral functions of low-density polaron liquids' arXiv (2023)
- Indu Kant Deo, Rui Gao, Rajeev K. Jaiman 'Combined space-time reduced-order model with three-dimensional deep convolution for extrapolating fluid dynamics' Physics of Fluids (2023)
- Benjamin Godwin, et al. 'A Single-Atom Upgrade to Polydicyclopentadiene' Macromolecules (2023)
- Yue Zhang, et al. 'A high-performance tellurium-sulfur cathode in carbonate-based electrolytes' Nano Energy (2023)
- Tian You, et al. 'Seismic loss and resilience assessment of tall-coupled cross-laminated timber wall building' Earthquake Spectra (2023)
- A. Goyal, A. Wachs 'An accurate and scalable direction-splitting solver for flows laden with non-spherical rigid bodies - Part 2: moving rigid bodies' Communications in Computational Physics (2023)
- Krissia Zawadzki, Alberto Nocera, Adrian E. Feiguin 'A time-dependent momentum-resolved scattering approach to core-level spectroscopies' Research Square (2023)
- Ahmad Rahmzadeh, M. Shahria Alam, Robert Tremblay 'Cyclic Response of Buckling-Restrained Stainless Steel Energy Dissipating Bars. I: Experimental Investigations' Journal of Engineering Mechanics (2023)
- Ahmad Rahmzadeh, Robert Tremblay, M. Shahria Alam 'Cyclic Response of Buckling-Restrained Stainless Steel Energy Dissipating Bars. II: Finite Element Investigations' Journal of Engineering Mechanics (2023)
- Yutao Kuang, Junshan Lai, Jolene P. Reid 'Transferrable selectivity profiles enable prediction in synergistic catalyst space' Chemical Science (2023)
- Rachel H. White, et al. 'The Unprecedented Pacific Northwest Heatwave of June 2021' Nature Communications (2023)
- Musanna Galib, Okan K. Orhan, Mauricio Ponga 'Engineering Chemo-Mechanical Properties of Zn Surfaces via Alucone Coating' The Journal of Physical Chemistry C (2023)
- Mohammad Khalifa, Joseph Salfi 'Nonlinearity and parametric amplification of superconducting nanowire resonators in magnetic field' Physical Review Applied (2023)
- Deyu Bo, et al. 'Specformer: Spectral Graph Neural Networks Meet Transformers' arXiv (2023)
- Mohamed Hendy, Mauricio Ponga 'A multiscale and multiphysics framework to simulate radiation damage in nano-crystalline materials' Journal of Nuclear Materials (2023)
- Pranav Garg, Shawn CC Hsueh, Steven S. Plotkin 'Predicting the feasibility of targeting a conserved region on the S2 domain of the SARS-CoV-2 spike protein' bioRxiv (2023)
- L. Jokiniemi, et al. 'Ab initio calculation of muon capture on Mg 24' Physical Review C (2023)
- Okan K. Orhan, Mohamed Hendy, Mauricio Ponga 'Electronic effects on the radiation damage in high-entropy alloys' Acta Materialia (2023)
- Xiaoyu Mao, Rajeev Jaiman 'An interface and geometry preserving phase-field method for fully Eulerian fluid-structure interaction' Journal of Computational Physics (2023)
- Tina Behnia, et al. 'On the Implicit Geometry of Cross-Entropy Parameterizations for Label-Imbalanced Data' arXiv (2023)
- Arash Mousemi, W. Kendal Bushe 'Modeling the presumed joint probability density function of conditioning variables in stratified turbulent flames' Combustion and Flame (2023)
- Sounik Kumar Banerjee, Ming Yang, Mahdi Taiebat 'Effect of coefficient of uniformity on cyclic liquefaction resistance of granular materials' Computers and Geotechnics (2023)
- Guodong Gai, Anthony Wachs 'High fidelity adaptive Cartesian octree grid computations of the flow past a Platonic polyhedron up to a Reynolds number of 200' Powder Technology (2023)
- Zihao Cheng, Anthony Wachs 'Hydrodynamic force and torque fluctuations in a random array of polydisperse stationary spheres' International Journal of Multiphase Flow (2023)
- Antoine Morente, Aashish Goyal, Anthony Wachs 'A highly scalable direction-splitting solver on regular cartesian grid to compute flows in complex geometries described by stl files' Fluids (2023)
- Damien P. Huet, et al. 'Motion and deformation of capsules flowing through a corner in the inertial and non-inertial regimes' arXiv (2023)
- Guodong Gai, Anthony Wachs 'On the streamwise vorticity generation and distribution in an angular particle wake' Journal of Fluid Mechanics (2023)
- Fatma Ben Abid, et al. 'Molecular characterization of Candida auris outbreak isolates in Qatar from patients with COVID-19 reveals the emergence of isolates resistant to three classes of antifungal drugs' Clinical Microbiology and Infection (2023)
- Juan C. Burckhardt, et al. 'Gut commensal Enterocloster species host inoviruses that are secreted in vitro and in vivo' Microbiome (2023)
- Xingzhe He, et al. 'Few-shot Geometry-Aware Keypoint Localization' Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (2023)
- Tom R. Booker, Sam Yeaman, Michael C. Whitlock 'Using genome scans to identify genes used repeatedly for adaptation' Evolution (2023)
- Kaitlin E. Sullivan, et al. 'Sharp cell-type-identity changes differentiate the retrosplenial cortex from the neocortex' Cell Reports (2023)
- Mohamed Hendy, Mauricio Ponga 'A multiscale and multiphysics framework to simulate radiation damage in nano-crystalline materials' Journal of Nuclear Materials (2023)
- M. Ponga, O. K. Orhan, D. Funes Rojas 'Computational Design of an Ultra-Strong High-Entropy Alloy' TMS Annual Meeting & Exhibition (2023)
- Mohamed Hendy, et al. 'Screening High-Entropy Alloys for Carbon Dioxide Reduction Reaction Using Alchemical Perturbation Density Functional Theory' TMS Annual Meeting & Exhibition (2023)
- M. Manav, M. Ponga, M. Ortiz 'Modeling hard-soft block copolymers as a liquid crystalline polymer' arXiv (2023)
- J. Perez Tobia, P.-J. J. Huang, Y. Ding, R. Saran Narayan, A. Narayan, J. Liu 'Machine Learning Directed Aptamer Search from Conserved Primary Sequences and Secondary Structures' ACS Synthetic Biology (2023)
- Alejandra M. Fuentes, et al. 'Raman spectroscopy and convolutional neural networks for monitoring biochemical radiation response in breast tumour xenografts' Scientific Reports (2023)
- Vipul Gupta, Apurva Narayan 'Do we need entire training data for adversarial training?' arXiv (2023)
- Abhijith Sharma, et al. 'Vulnerability of CNNs against Multi-Patch Attacks' Proceedings of the 2023 ACM Workshop on Secure and Trustworthy Cyber-Physical Systems (2023)
- Jeremy Heyl, et al. 'X-ray Polarization Reveals the Precessions of the Neutron Star in Hercules X-1' Research Square (2023)
- Xiangyun Long, et al. 'X-ray Polarimetry of the accreting pulsar 1A~ 0535+ 262 in the supercritical state with PolarLight' arXiv (2023)
- Christian Malacaria, et al. 'A polarimetric-oriented X-ray stare at the accreting pulsar EXO 2030+ 375' arXiv (2023)
- A. A. Mushtukov, et al. 'X-ray polarimetry of X-ray pulsar X Persei: another orthogonal rotator?' arXiv (2023)
- Javiera Parada, et al. 'Carbon stars as standard candles–III. Un-binned maximum likelihood fitting and comparison with TRGB estimations' Monthly Notices of the Royal Astronomical Society (2023)
- Niccolò Bucciantini, et al. 'Simultaneous space and phase resolved X-ray polarimetry of the Crab Pulsar and Nebula' Nature Astronomy (2023)
- Sofia V. Forsblom, et al. 'IXPE observations of the quintessential wind-accreting X-ray pulsar Vela X-1' The Astrophysical Journal Letters (2023)
- Fleury, Leesa, Ilaria Caiazzo, and Jeremy Heyl 'The origin of ultramassive white dwarfs: hints from Gaia EDR3' Monthly Notices of the Royal Astronomical Society (2023)
- González-Caniulef, Denis, Ilaria Caiazzo, and Jeremy Heyl 'Unbinned likelihood analysis for X-ray polarization' Monthly Notices of the Royal Astronomical Society (2023)
- Tsygankov, Sergey S., et al. 'X-ray pulsar GRO J1008 $-$57 as an orthogonal rotator' arXiv (2023)
- Zane, Silvia, et al. 'A strong X-ray polarization signal from the magnetar 1RXS J170849. 0-400910' The Astrophysical journal letters (2023)
- Capitanio, Fiamma, et al. 'Polarization Properties of the Weakly Magnetized Neutron Star X-Ray Binary GS 1826–238 in the High Soft State' The Astrophysical Journal (2023)
- Rahmzadeh, Ahmad, M. Shahria Alam, and Robert Tremblay '3D response simulation of a bridge with a posttensioned base rocking steel pier under sequential loading of traffic loads, braking force, and earthquake excitations' Earthquake Engineering & Structural Dynamics (2023)
- Rahmzadeh, Ahmad, Robert Tremblay, and M. Shahria Alam 'Cyclic Response of Buckling-Restrained Stainless Steel Energy Dissipating Bars. II: Finite Element Investigations' Journal of Engineering Mechanics (2023)
- Rahmzadeh, Ahmad, M. Shahria Alam, and Robert Tremblay 'Cyclic Response of Buckling-Restrained Stainless Steel Energy Dissipating Bars. I: Experimental Investigations' Journal of Engineering Mechanics (2023)
- Jo, Eunkyul Leah, et al. 'K-UniMorph: Korean Universal Morphology and its Feature Schema' arXiv (2023)
- Dai, Darlene LY, et al. 'Breastfeeding enrichment of B. longum subsp. infantis mitigates the effect of antibiotics on the microbiota and childhood asthma risk' Med (2023)
- Setayesh, Mehdi, Xiaoxiao Li, and Vincent WS Wong 'PerFedMask: Personalized Federated Learning with Optimized Masking Vectors' The Eleventh International Conference on Learning Representations (2023)
- Deng, Wenlong, et al. 'On Fairness of Medical Image Classification with Multiple Sensitive Attributes via Learning Orthogonal Representations' arXiv (2023)
- Ruscher, Céline, et al. 'Tuning the thermal conductivity of silicon nanowires by surface passivation' arXiv (2023)
- Fornes, Oriol, et al. 'OnTarget: in silico design of MiniPromoters for targeted delivery of expression' Nucleic Acids Research (2023)
- Novakovsky, Gherman, et al. 'In silico discovery of small molecules for efficient stem cell differentiation into definitive endoderm' Stem Cell Reports (2023)
- Toledo-Marín, J. Quetzalcóatl, et al. 'Prediction of Blood Risk Score in Diabetes Using Deep Neural Networks' Journal of Clinical Medicine (2023)
- Hedlin, Eric, et al. 'CN-DHF: Compact Neural Double Height-Field Representations of 3D Shapes' arXiv (2023)
- Hedlin, Eric, et al. 'Unsupervised Semantic Correspondence Using Stable Diffusion' arXiv (2023)
- Li, Xinru, and Simon Donner 'Assessing future projections of warm‐season marine heatwave characteristics with three CMIP6 models' Journal of Geophysical Research: Oceans (2023)
- Tayyab, Maryam, et al. 'Accounting for uncertainty in training data to improve machine learning performance in predicting new disease activity in early multiple sclerosis' Frontiers in Neurology (2023)
- Jain, Prasham, Lutz Lampe, and Jeebak Mitra 'Joint PMD Tracking and Nonlinearity Compensation with Deep Neural Networks' Journal of Lightwave Technology (2023)
- Nashid, Noor, Mifta Sintaha, and Ali Mesbah 'Retrieval-based prompt selection for code-related few-shot learning' Proceedings of the 45th International Conference on Software Engineering (ICSE’23) (2023)
- Sintaha, Mifta, Noor Nashid, and Ali Mesbah 'Katana: Dual Slicing Based Context for Learning Bug Fixes' ACM Transactions on Software Engineering and Methodology (2023)
- Robertson, Ruairi C., et al. 'The gut microbiome and early-life growth in a population with high prevalence of stunting' Nature Communications (2023)
- Woo, Jeonghyun, Gururaj Saileshwar, and Prashant J. Nair 'Scalable and Secure Row-Swap: Efficient and Safe Row Hammer Mitigation in Memory Systems' 2023 IEEE International Symposium on High-Performance Computer Architecture (HPCA) (2023)
- Nocera, Alberto, and Adrian Feiguin 'Auger spectroscopy beyond the ultra-short core-hole relaxation time approximation' arXiv (2023)
- Banerjee, Debshikha, et al. 'Ground-state and spectral properties of the doped one-dimensional optical Hubbard-Su-Schrieffer-Heeger model' Physical Review B (2023)
- Di Bello, G., et al. 'Qubit-oscillator relationships in the open quantum Rabi model: the role of dissipation' The European Physical Journal Plus (2023)
- Bin, Junchi, et al. 'RHPMF: A context-aware matrix factorization approach for understanding regional real estate market' Information Fusion (2023)
- Bin, Junchi, et al. 'The registration of visible and thermal images through multi-objective optimization' Information Fusion (2023)
- Zaji, Amirhossein, et al. 'AutoOLA: Automatic object level augmentation for wheat spikes counting' Computers and Electronics in Agriculture (2023)
- Ramezankhani, Milad 'Data-efficient and uncertainty-aware hybrid machine learning in advanced composites manufacturing' University of British Columbia (2023)
- Yu, Tianze, et al. 'PA-Tran: Learning to Estimate 3D Hand Pose with Partial Annotation' Sensors (2023)
- Ding, Xin, et al. 'Distilling and transferring knowledge via cGAN-generated samples for image classification and regression' Expert Systems with Applications (2023)
- Wang, Yongwei, et al. 'Ssd-kd: A self-supervised diverse knowledge distillation method for lightweight skin lesion classification using dermoscopic images' Medical Image Analysis (2023)
- Cheng, Jiaming, et al. 'A Bandit Approach to Online Pricing for Heterogeneous Edge Resource Allocation' arXiv (2023)
- Saberi, Iman, and Fatemeh H. Fard 'Model-Agnostic Syntactical Information for Pre-Trained Programming Language Models' arXiv (2023)
- Shahbazi, Ramin and Fatemeh H. Fard 'APIContext2Com: Code Comment Generation by Incorporating Pre-Defined API Documentation' arXiv (2023)
- Hadi, Mohammad A., and Fatemeh H. Fard 'Evaluating pre-trained models for user feedback analysis in software engineering: A study on classification of app-reviews' Empirical Software Engineering (2023)
- Stipa, Sebastiano, et al. 'TOSCA–An Open-Source Finite-Volume LES Environment for Wind Farm Flows' Wind Energy Science Discussions (2023)
- Noonan, Michael J., et al. 'The search behavior of terrestrial mammals' bioRxiv (2023)
- Socias‐Martínez, Lluis, Louise R. Peckre, and Michael J. Noonan 'Are trapping data suited for home‐range estimation?' Ecography (2023)
- Singla, Rohit, et al. 'Automatic measurement of kidney dimensions in two-dimensional ultrasonography is comparable to expert sonographers' Journal of Medical Imaging (2023)
- Agarwal, Shubham, et al. 'The influence of microstructure on the tensile properties of a creped tissue paper: Modeling and experiments' Mechanics of Materials (2023)
- Samara, Ahmad, et al. 'Cortical gradients during naturalistic processing are hierarchical and modality-specific' NeuroImage (2023)
- Zhang, Yue, et al. 'A high-performance tellurium-sulfur cathode in carbonate-based electrolytes' Nano Energy (2023)
- George, Emma E., et al. 'A single cryptomonad cell harbors a complex community of organelles, bacteria, a phage, and selfish elements' Current Biology (2023)
- Natola, Libby, et al. 'Geographic variability of hybridization between red-breasted and red-naped sapsuckers' Evolution (2023)
- Umashankar, Hariharan, et al. 'Modeling solute-grain boundary interactions in a bcc Ti-Mo alloy using density functional theory' Computational Materials Science (2023)
- Weilbach, Christian Dietrich, et al. 'Scaling Graphically Structured Diffusion Models' ICML 2023 Workshop on Structured Probabilistic Inference {&} Generative Modeling (2023)
- Chardon, Nathalie Isabelle, et al. 'Species-Specific Responses to Human Trampling Indicate Alpine Plant Size Is More Sensitive than Reproduction to Disturbance' Plants (2023)
- Diluvi, Gian Carlo, Benjamin Bloem-Reddy, and Trevor Campbell 'Mixed Variational Flows for Discrete Variables' arXiv (2023)
- Zachary J. Morse et al. 'Virus induced dysbiosis promotes type 1 diabetes onset' Frontiers in Immunology (2023)
- Neda Ahmadi et al. 'Transformer-based spatio-temporal analysis for classification of aortic stenosis severity from echocardiography cine series' IEEE Transactions on Medical Imaging (2023)
- Masoud Mokhtari et al. 'EchoGLAD: Hierarchical Graph Neural Networks for Left Ventricle Landmark Detection on Echocardiograms' International Conference on Medical Image Computing and Computer-Assisted Intervention (2023)
- Hooman Vaseli et al. 'ProtoASNet: Dynamic Prototypes for Inherently Interpretable and Uncertainty-Aware Aortic Stenosis Classification in Echocardiography' International Conference on Medical Image Computing and Computer-Assisted Intervention (2023)
- Masoud Mokhtari et al. 'Gemtrans: A general, echocardiography-based, multi-level transformer framework for cardiovascular diagnosis' International Workshop on Machine Learning in Medical Imaging (2023)
- Courtney Hoskinson et al. 'Delayed gut microbiota maturation in the first year of life is a hallmark of pediatric allergic disease' Nature Communications (2023)
- Yuanyuan Wei, Roger Tam, and Xiaoying Tang 'MProtoNet: A Case-Based Interpretable Model for Brain Tumor Classification with 3D Multi-parametric Magnetic Resonance Imaging' arXiv (preprint) (2023)
- Huang, Yijin, et al. 'Identifying the key components in ResNet-50 for diabetic retinopathy grading from fundus images: a systematic investigation' Diagnostics (2023)
- Katharine M. Ng et al. 'Single-strain behavior predicts responses to environmental pH and osmolality in the gut microbiota' Mbio (2023)
- Timothy J. Whelan et al. 'Omitting radiotherapy after breast-conserving surgery in luminal A breast cancer' New England Journal of Medicine (2023)
- Torsten O. Nielsen et al. 'Ki67 assessment protocol as an integral biomarker for avoiding radiotherapy in the LUMINA breast cancer trial' Histopathology (2023)
- Julia Anstett et al. 'A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters' Scientfic Data (2023)
- Alexis A. Vega et al. 'Methionine-producing tumor micro (be) environment fuels growth of solid tumors' Cellular Oncology (2023)
- Brandon Kieft et al. 'Kieft, Brandon, et al. "Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater." Nature Communications 14.1 (2023): 5380.' Nature Communications (2023)
- Nárlon C. Boa Sorte Silva et al. 'Improved intraindividual variability in cognitive performance following cognitive and exercise training in older adults' Journal of the International Neuropsychological Society (2023)
- Nárlon C. Boa Sorte Silva et al. 'Myelin and physical activity in older adults with cerebral small vessel disease and mild cognitive impairment545-553.' The Journals of Gerontology: Series A (2023)
- Guilherme Moraes Balbim et al. 'Compositions of Time-Use 24-Hour Activity Cycle Behaviours in Older Adults with Mild Cognitive Impairment: Associations with Brain Structure' Canadian Geriatrics Journal (2023)
- Michael P. Kinach and Matthew W. Choptuik 'Dynamical evolution of U(1) gauged Q-balls in axisymmetry' Physical Review D (2023)
- Gray D. Reid and Matthew W. Choptuik 'Stability of Non-Minimally Coupled Topological-Defect Boson Stars' arXiv (preprint) (2023)
- Gray D. Reid and Matthew W. Choptuik 'RCCZ4: A Reference Metric Approach to Z4' arXiv (preprint) (2023)
- Gray D. Reid and Matthew W. Choptuik 'Universality in the Critical Collapse of the Einstein-Maxwell System' arXiv (preprint) (2023)
- Amy Liu, Armando Geraldes, and Eric B. Taylor 'Development and testing of diagnostic molecular markers to differentiate among three species of Salvelinus: Arctic char, Dolly Varden, and Bull trout' Conservation Genetics Resources (2023)
- Mitchell Wiebe et al. 'The effect of spatial resolution on deep learning classification of lung cancer histopathology' The British Institute of Radiology (2023)
- Yifan Yan et al. 'Comprehensive anthocyanin and flavonol profiling and fruit surface color of 20 blueberry genotypes during postharvest storage' Postharvest Biology and Technology (2023)
- Thorsten Knipfer et al. 'Cessation of berry growth coincides with leaf complete stomatal closure at pre-veraison for grapevine (Vitis vinifera) subjected to progressive drought stress' Annals of Botany (2023)
- Jeong-gi Kwak et al. 'ViVid-1-to-3: Novel View Synthesis with Video Diffusion Models' arXiv (preprint) (2023)
- Fei Wang et al. 'Deep Learning-Enabled MS/MS Spectrum Prediction Facilitates Automated Identification Of Novel Psychoactive Substances' Analytical Chemistry (2023)
- Eric Hedlin et al. 'Unsupervised Keypoints from Pretrained Diffusion Models' arXiv (preprint) (2023)
- Aarshana R. Parekh and Rajeev K. Jaiman 'Wake Interference Effects on Flapping Dynamics of Elastic Inverted Foil' arXiv (preprint) (2023)
- Jeremy Heyl et al. 'The detection of polarized x-ray emission from the magnetar 1E 2259+586' arXiv (preprint) (2023)
- Debashish Mukherji, Shubham Agarwal, Tiago Espinosa de Oliveira, Céline Ruscher, and Jörg Rottler 'Simple generic picture of tensile toughness in solid polymer blends' Physical Review Materials (2023)
- Karyn D. Suchy et al. 'Seasonal and regional variability of model-based zooplankton biomass in the Salish Sea and evaluation against observations' Progress in Oceanography (2023)
- Aryan Tajmir Riahi et al. 'EMPOT: partial alignment of density maps and rigid body fitting using unbalanced Gromov-Wasserstein divergence' arXiv (preprint) (2023)
- Miguel Biron-Lattes et al. 'autoMALA: Locally adaptive Metropolis-adjusted Langevin algorithm' arXiv (preprint) (2023)
- AbdelRahim Elmadany, El Moatez Billah Nagoudi, and Muhammad Abdul-Mageed 'Octopus: A Multitask Model and Toolkit for Arabic Natural Language Generation' arXiv (preprint) (2023)
- Rohit Singla et al. 'The open kidney ultrasound data set' Lecture Notes in Computer Science (2023)
- Hubert Courteau-Godmaire 'A Cosserat approach to modelling the deformation mechanisms of uncured composites during processing' University of British Columbia (2023)
- Yuecheng Cai and Jasmin Jelovica 'Graph Neural Network for Stress Predictions in Stiffened Panels Under Uniform Loading' arXiv (preprint) (2023)
- Ramezankhani, Milad, et al. 'Smart manufacturing under limited and heterogeneous data: a sim-to-real transfer learning with convolutional variational autoencoder in thermoforming' International Journal of Computer Integrated Manufacturing (2023)
2022
- Henderson, J., et al 'Coulomb excitation of the|T_z|= 1/2, A= 23 mirror pair' Physical Review C (2022)
- Veronica Hirsch-Reinshagen, et al. 'International Spinal Cord Injury Biobank: A Biorepository and Resource for Translational Research' Journal of Neurotrauma (2022)
- Isaiah O. Betinol, Yutao Kuang, Jolene P. Reid 'Guiding Target Synthesis with Statistical Modeling Tools: A Case Study in Organocatalysis' Organic Letters (2022)
- A. Cherkasov 'THE USE OF DEEP DOCKING FOR AUTOMATED, CONSENSUS-BASED HIT IDENTIFICATION IN DRUG DISCOVERY' XXXVIII Symposium of Bioinformatics and Computer-Aided Drug Discovery (2022)
- Christian Kames, et al. 'Recovering SWI-filtered phase data using deep learning' Magnetic Resonance in Medicine (2022)
- W. S. Porter, et al. 'Mapping the N= 40 island of inversion: Precision mass measurements of neutron-rich Fe isotopes' Physical Review C (2022)
- Shengyu Yan, Jasmin Jelovica 'Topology Optimization of Joints Between Prismatic Sandwich Panels and Girders Under In-Plane and Bending Loads' International Conference on Offshore Mechanics and Arctic Engineering (2022)
- Nicolas Legendre, Khanh Dao Duc, Nina Miolane 'Defining an action of SO (d)-rotations on images generated by projections of d-dimensional objects: Applications to pose inference with Geometric VAEs' arXiv (2022)
- B. S. Hu, et al. 'Ab initio structure factors for spin-dependent dark matter direct detection' Physical Review Letters (2022)
- Anthony-Alexander Christidis 'A data-driven ensemble framework for modeling high-dimensional data: theory, methods, algorithms, and applications' University of British Columbia (2022)
- Junshan Lai, Jolene P. Reid 'Interrogating the thionium hydrogen bond as a noncovalent stereocontrolling interaction in chiral phosphate catalysis' Chemical Science (2022)
- Rodrigo S. Mitishita, et al. 'Primary Cementing of Horizontal Wellbores With Solid Cutting Beds' International Conference on Offshore Mechanics and Arctic Engineering (2022)
- Rohit Singla, et al. 'The open kidney ultrasound data set' arXiv (2022)
- S. R. Stroberg, et al. 'Systematics of E 2 strength in the s d shell with the valence-space in-medium similarity renormalization group' Physical Review C (2022)
- Masoud Mokhtari, et al. 'EchoGNN: Explainable Ejection Fraction Estimation with Graph Neural Networks' International Conference on Medical Image Computing and Computer-Assisted Intervention (2022)
- Emilie Therese Theberge 'Investigating sex differences in the polygenic risk of major depressive disorder and shared associations with cardiovascular disease' University of British Columbia (2022)
- Yuecheng Cai, Jasmin Jelovica 'Structural Optimization of Ships: Benchmark Study of Metaheuristic Algorithms and Constraint Handling Approaches' International Conference on Offshore Mechanics and Arctic Engineering (2022)
- Mark Trinder, et al. 'Polygenic architecture and cardiovascular risk of familial combined hyperlipidemia' Atherosclerosis (2022)
- A. Nag, et al. 'Quadrupolar magnetic excitations in an isotropic spin-1 antiferromagnet' Nature Communications (2022)
- Ahmad Rahmzadeh, Robert Tremblay, M. Shahria Alam 'Finite-Element Simulation of the Lateral Response of Posttensioned Base Rocking Steel Bridge Piers' Journal of Structural Engineering (2022)
- Parisa Sarmadi, Ian A. Frigaard 'Effects of Rheological Properties on Primary Cementing of Irregular Horizontal Wells' International Conference on Offshore Mechanics and Arctic Engineering (2022)
- William Harvey, et al. 'Flexible Diffusion Modeling of Long Videos' arXiv (2022)
- A. Tajmir Riahi, et al. 'AlignOT: An optimal transport based algorithm for fast 3D alignment with applications to cryogenic electron microscopy density maps' arXiv (2022)
- Yunpeng Liu, et al. 'Vehicle Type Specific Waypoint Generation' arXiv (2022)
- Daniel Rebain, et al. 'Attention Beats Concatenation for Conditioning Neural Fields' arXiv (2022)
- Junshan Lai, et al. 'A Statistical Modeling Approach to Catalyst Generality Assessment in Enantioselective Synthesis' chemRxiv (2022)
- Mauricio Ponga, et al. 'Effects of the local chemical environment on vacancy diffusion in multi-principal element alloys' arXiv (2022)
- Jason Yoo, Frank Wood 'BayesPCN: A Continually Learnable Predictive Coding Associative Memory' arXiv (2022)
- Alberto Nocera, Gonzalo Alvarez 'Root-N Krylov-space correction vectors for spectral functions with the density matrix renormalization group' Physical Review B (2022)
- Y. Tseng, et al. 'Crossover of the high-energy spin fluctuations from collective triplons to localized magnetic excitations in doped Sr14-xCaxCu24O41 cuprate ladders' arXiv (2022)
- Robert Powel, et al. 'Ground state magnetic dipole moment of 40Sc' Physical Review C (2022)
- Ana Ciocoiu, Mohammad Khalifa, Joe Salfi 'Towards computer-assisted design of hole spin qubits in quantum dot devices' arXiv (2022)
- Vasileios Lioutas, Adam Scibior, Frank Wood 'TITRATED: Learned Human Driving Behavior without Infractions via Amortized Inference' NeurIPS 2022 Workshop on Machine Learning for Autonomous Driving (2022)
- David Funes Rojas, et al. 'Mechanical and microstructural properties of a CoCrFe0. 75NiMo0. 3Nb0. 125 high-entropy alloy additively manufactured via cold-spray' Journal of Alloys and Compounds (2022)
- A. Rahmzadeh, M. S. Alam, R. Tremblay 'Characterization of the Lateral Response of Base Rocking Steel Bridge Piers' Canadian Society of Civil Engineering Annual Conference (2022)
- Juan C. Burckhardt, et al. 'Gut commensal Enterocloster species host inoviruses that are secreted in vitro and in vivo' bioRxiv (2022)
- Adam Vernon, et al. 'Nuclear moments put a new spin on the structure of 131In' Research Square (2022)
- Indu Kant Deo, Rui Gao, Rajeev Jaiman 'Combined space-time reduced-order model with 3D deep convolution for extrapolating fluid dynamics' arXiv (2022)
- R. Silwal, et al. 'Summit of the N= 40 island of inversion: Precision mass measurements and ab initio calculations of neutron-rich chromium isotopes' Physics Letters B (2022)
- Rui Gao, Rajeev Jaiman 'Quasi-Monolithic Graph Neural Network for Fluid-Structure Interaction' arXiv (2022)
- T. Koiwai, et al. 'A first glimpse at the shell structure beyond 54Ca: Spectroscopy of 55K, 55Ca, and 57Ca' Physics Letters B (2022)
- Emilian Tuca, Gino DiLabio, Alberto Otero-de-la-Roza 'Minimal Basis Set Hartree-Fock Corrected with Atom-Centered Potentials for Molecular Crystal Modeling and Crystal Structure Prediction' Journal of Chemical Information and Modeling (2022)
- Adrian Feiguin, Alberto Nocera, Krissia Zawadzki 'A time-dependent momentum-resolved scattering approach to core-level spectroscopies' Research Square (2022)
- Indu Kant Deo, Rajeev Jaiman 'Learning wave propagation with attention-based convolutional recurrent autoencoder net' arXiv (2022)
- William Casazza, et al. 'Sex-dependent placental mQTL provide insight into the prenatal origins of childhood-onset traits and conditions' medRxiv (2022)
- Berend Zwartsenberg, et al. 'Conditional Permutation Invariant Flows' arXiv (2022)
- Prasham Jain, Lutz Lampe, Jeebak Mitra 'Joint PMD Tracking and Nonlinearity Compensation with Deep Neural Networks' arXiv (2022)
- Mohamad Amin Mohamadi, Wonho Bae, Danica J. Sutherland 'Making Look-Ahead Active Learning Strategies Feasible with Neural Tangent Kernels' arXiv (2022)
- Yuhe Jin, et al. 'TUSK: Task-Agnostic Unsupervised Keypoints' arXiv (2022)
- M. Khalifa, J. Salfi 'Nonlinearity and Parametric Amplification of Superconducting Nanowire Resonators in Magnetic Field' arXiv (2022)
- Viki Kumar Prasad, Alberto Otero-de-la-Roza, Gino A. DiLabio 'Small-Basis Set Density-Functional Theory Methods Corrected with Atom-Centered Potentials' Journal of Chemical Theory and Computation (2022)
- Wang Yang, et al. 'Symmetry analysis of bond-alternating Kitaev spin chains and ladders' Physical Review B (2022)
- Mohamad Amin Mohamadi, Danica J. Sutherland 'A Fast, Well-Founded Approximation to the Empirical Neural Tangent Kernel' arXiv (2022)
- Sadegh Mahdavi, et al. 'Towards Better Out-of-Distribution Generalization of Neural Algorithmic Reasoning Tasks' arXiv (2022)
- Gherman Novakovsky, et al. 'ExplaiNN: interpretable and transparent neural networks for genomics' bioRxiv (2022)
- Indu Kant Deo, Rajeev Jaiman 'Predicting waves in fluids with deep neural network' Physics of Fluids (2022)
- Viki Kumar Prasad, Alberto Otero-de-la-Roza, Gino A. DiLabio 'Fast and accurate quantum mechanical modeling of large molecular systems using small basis set Hartree-Fock methods corrected with atom-centered potentials' Journal of Chemical Theory and Computation (2022)
- Shayan Heydari, et al. 'Fluid-structure interaction of a flexible cantilever cylinder at low Reynolds numbers' Physical Review Fluids (2022)
- Muhammad Adnan, et al. 'Heterogeneous Acceleration Pipeline for Recommendation System Training' arXiv (2022)
- Musanna Galib, Okan K. Orhan, Mauricio Ponga 'Engineering Chemo-Mechanical Properties of Zn Surfaces via Alucone Coating' arXiv (2022)
- P. Sarmadi, et al. 'Effects of wellbore irregularity on primary cementing of horizontal wells, Part 2: Small scale effects' Journal of Petroleum Science and Engineering (2022)
- David Childers, et al. 'Differentiable State-Space Models and Hamiltonian Monte Carlo Estimation' National Bureau of Economic Research (2022)
- Shawn CC Hsueh, Adekunle Aina, Steven S. Plotkin 'Accelerated ensemble generation for cyclic peptides using a Reservoir-REMD implementation in GROMACS' bioRxiv (2022)
- R. Zhang, I. A. Frigaard 'Primary cementing of vertical wells: displacement and dispersion effects in narrow eccentric annuli' Journal of Fluid Mechanics (2022)
- J. M. Yao, et al. 'Ab initio studies of double Gamow-Teller transition and its correlation with neutrinoless double beta decay' arXiv (2022)
- Vasileios Lioutas, et al. 'Critic Sequential Monte Carlo' arXiv (2022)
- Robert C. Edgar, et al. 'Petabase-scale sequence alignment catalyses viral discovery' Nature (2022)
- Wang Yang, et al. 'Nonsymmorphic Luttinger liquids in the generalized antiferromagnetic Kitaev spin-1/2 chain' arXiv (2022)
- Wang Yang, et al. 'Symmetry analysis of quasi-one-dimensional bond-alternating Kitaev spin models' arXiv (2022)
- Rachit Gupta, Rajeev Jaiman 'Three-dimensional deep learning-based reduced order model for unsteady flow dynamics with variable Reynolds number' Physics of Fluids (2022)
- Mohamed Hendy, Mauricio Ponga 'A multiscale and multiphysics framework to simulate radiation damage in nano-crystalline materials' arXiv (2022)
- Rachit Gupta, Rajeev Jaiman 'A hybrid partitioned deep learning methodology for moving interface and fluid-structure interaction' Computers & Fluids (2022)
- David Funes Rojas, Mewael Isiet, Mauricio Ponga 'Dynamic recrystallization in face-centered cubic particles during high-velocity impacts' Mechanics of Materials (2022)
- Mohit Pandey, et al. 'Ligand Binding Prediction using Protein Structure Graphs and Residual Graph Attention Networks' bioRxiv (2022)
- Xiaoyu Mao, Rajeev Jaiman 'An interface and geometry preserving phase-field method for fully Eulerian fluid-structure interaction' arXiv (2022)
- Amir Chizfahm, Rajeev K. Jaiman 'Deep Learning for Predicting Frequency Lock-in of a Freely Vibrating Sphere' Physics of Fluids (2022)
- Andrew Chang, et al. 'Homotypic fibrillization of TMEM106B across diverse neurodegenerative diseases' Cell (2022)
- Wei-Rui Chen, Muhammad Abdul-Mageed 'Improving Neural Machine Translation of Indigenous Languages with Multilingual Transfer Learning' arXiv (2022)
- Wang Yang, et al. 'Emergent SU(2)_1 conformal symmetry in the spin-1/2 Kitaev-Gamma chain with a Dzyaloshinskii-Moriya interaction' arXiv (2022)
- Mohammad Mahdi Kazemi Esfeh, et al. 'DEUE: Delta Ensemble Uncertainty Estimation for a More Robust Estimation of Ejection Fraction' International Conference on Medical Image Computing and Computer-Assisted Intervention (2022)
- Tim Straubinger, Robert Xiao, Helge Rhodin 'Learned acoustic reconstruction using synthetic aperture focusing' ICASSP 2022-2022 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) (2022)
- Christos Thrampoulidis, et al. 'Imbalance trouble: Revisiting neural-collapse geometry' arXiv (2022)
- Muhammad Abdul-Mageed, et al. 'NADI 2022: The Third Nuanced Arabic Dialect Identification Shared Task' arXiv (2022)
- Kasra Asnaashari, Roman Krems 'Quantum annealing with 2Sigma molecules' Bulletin of the American Physical Society (2022)
- Elham Torabian, Roman V. Krems 'Optimal quantum kernels for small data classification' arXiv (2022)
- Jun Dai, Roman V. Krems 'Quantum Gaussian process model of potential energy surface for a polyatomic molecule' The Journal of Chemical Physics 156.18 (2022)
- Shawn CC Hsueh, Adekunle Aina, Steven S. Plotkin 'Ensemble Generation for Linear and Cyclic Peptides Using a Reservoir Replica Exchange Molecular Dynamics Implementation in GROMACS' The Journal of Physical Chemistry B (2022)
- Asghar AmaniDashlejeh, Cristiano Loss 'Reliability-based design optimization of strengthened and reinforced glulam beams in bending' Wood Material Science & Engineering (2022)
- Sounik Kumar Banerjee 'Effects of Particle Size Distribution and Particle Shape on Cyclic Liquefaction Response of Granular Materials' University of British Columbia (2022)
- Saeid Naderiparizi, et al. 'Amortized rejection sampling in universal probabilistic programming' International Conference on Artificial Intelligence and Statistics (2022)
- Haoyang Li, et al. 'Strain-Rate-Dependent mechanical behavior of a non-Equimolar CoCrFeMnNi high entropy alloy with a segmented coarse grain structure' Materialia (2022)
- Okan K. Orhan, et al. 'Exploring the compositional space of high-entropy alloys for cost-effective high-temperature applications' Frontiers in Materials (2022)
- Haoyang Li, et al. 'Micro-hardness and strain-rate-dependent compressive response of an ultra-light-weight Mg-Li-Al alloy' Journal of Alloys and Compounds (2022)
- Mohammadreza Fazlali, Mauricio Ponga, Xiaoliang Jin 'Analytical Modeling of Shear Localization in Orthogonal Cutting Processes' Journal of Manufacturing Science and Engineering (2022)
- Hayden Owen Scheiber, Grenfell N. Patey 'Binary Salt Structure Classification with Convolutional Neural Networks: Application to Crystal Nucleation and Melting Point Calculations' The Journal of Chemical Physics (2022)
- Yi Ren, Allan K. Bertram, G. N. Patey 'Influence of pH on Ice Nucleation by Kaolinite: Experiments and Molecular Simulations' The Journal of Physical Chemistry A (2022)
- Abhishek Soni, G. N. Patey 'Ice Nucleation by the Primary Prism Face of Silver Iodide' The Journal of Physical Chemistry C (2022)
- Ruairi C. Robertson, et al. 'The gut microbiome and early-life growth in a population with high prevalence of stunting' medRxiv (2022)
- Shawn CC Hsueh, et al. 'First Principles Calculation of Protein–Protein Dimer Affinities of ALS-Associated SOD1 Mutants' Frontiers in molecular biosciences (2022)
- Junchi Bin, et al. 'An Efficient and Uncertainty-Aware Decision Support System for Disaster Response Using Aerial Imagery' Sensors (2022)
- J-C. Loudet, et al. 'Particle trapped at the isotropic-nematic liquid crystal interface: Elastocapillary phenomena and drag forces' Physical Review E (2022)
- Manoj Kumar Maurya, et al. 'Thermal Conductivity of Semicrystalline Polymer Networks: Crystallinity or Cross-Linking?' ACS Macro Letters (2022)
- James Wu, Debashish Mukherji 'Comparison of all atom and united atom models for thermal transport calculations of amorphous polyethylene' Computational Materials Science (2022)
- Jasmin Wächter, et al. 'Transcriptomic mapping of the metzincin landscape in human trophoblasts' bioRxiv (2022)
- Chiyu Zhang, Muhammad Abdul-Mageed, El Moatez Billah Nagoudi 'Decay No More: A Persistent Twitter Dataset for Learning Social Meaning' arXiv (2022)
- Chiyu Zhang, Muhammad Abdul-Mageed, Ganesh Jawahar 'InfoDCL: A Distantly Supervised Contrastive Learning Framework for Social Meaning' arXiv (2022)
- Ganesh Jawahar, Muhammad Abdul-Mageed, Laks VS Lakshmanan 'Automatic Detection of Entity-Manipulated Text using Factual Knowledge' arXiv (2022)
- Arthur Ecoffet, et al. 'Application of transport-based metric for continuous interpolation between cryo-EM density maps' AIMS Mathematics (2022)
- Mifta Sintaha, Noor Nashid, Ali Mesbah 'Katana: Dual Slicing-Based Context for Learning Bug Fixes' arXiv (2022)
- Marjane Namavar, Noor Nashid, Ali Mesbah 'A controlled experiment of different code representations for learning-based program repair' Empirical Software Engineering (2022)
- Nick Rochlin, Jeff Gardner, Elizabeth Kinney 'Evaluating research computing training and support as part of a broader digital research infrastructure needs assessment' Practice and Experience in Advanced Research Computing (2022)
- Xingzhe He, Bastian Wandt, Helge Rhodin 'Ganseg: Learning to segment by unsupervised hierarchical image generation' Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (2022)
- Shih-Yang Su, Timur Bagautdinov, Helge Rhodin 'Danbo: Disentangled articulated neural body representations via graph neural networks' Computer Vision–ECCV 2022: 17th European Conference (2022)
- Jared A. Grummer, et al. 'The immediate costs and long‐term benefits of assisted gene flow in large populations' Conservation Biology (2022)
- David Funes Rojas, et al. 'Mechanical and microstructural properties of a CoCrFe0. 75NiMo0. 3Nb0. 125 high-entropy alloy additively manufactured via cold-spray' Journal of Alloys and Compounds (2022)
- David Funes Rojas, Mewael Isiet, Mauricio Ponga 'Dynamic recrystallization in face-centered cubic particles during high-velocity impacts' Mechanics of Materials (2022)
- Mohammadreza Fazlali, Mauricio Ponga, Xiaoliang Jin 'Predictive model of chip segmentation in machining of high-strength metallic alloys' Journal of Materials Processing Technology (2022)
- Okan K. Orhan, Mauricio Ponga 'Short-ranged ordering for improved mean-field simulation of disordered media: insights from refractory-metal high-entropy alloy carbonitrides' arXiv (2022)
- Okan K. Orhan, Mauricio Ponga 'Engineering ultra-strong Mg-Li-Al-based light-weight alloys from first principles' arXiv (2022)
- Javier Perez Tobia, et al. 'Machine Learning Directed Aptamer Search from Conserved Primary Sequence and Secondary Structure' chemRxiv (2022)
- Kumar, Satyadwyoom, and Apurva Narayan 'Introducing Diversity In Feature Scatter Adversarial Training Via Synthesis' 26th International Conference on Pattern Recognition (2022)
- Chakraborty, Aniket, et al. 'Improving imbalanced dataset classification using Conditional Classifier-Generator (cCGen)' IEEE International Conference on Systems, Man, and Cybernetics (2022)
- Gaurav, Ramashish, Bryan Tripp, and Apurva Narayan 'Spiking Approximations of the MaxPooling Operation in Deep SNNs' International Joint Conference on Neural Networks (2022)
- Grisel-Davy, Arthur, et al. 'Work-in-Progress: Boot Sequence Integrity Verification with Power Analysis' International Conference on Embedded Software (2022)
- Barazandeh, Marjan, et al. 'The cellular response to drug perturbation is limited: comparison of large-scale chemogenomic fitness signatures' BMC genomics (2022)
- Xie, Fei, et al. 'Vela pulsar wind nebula X-rays are polarized to near the synchrotron limit' Nature (2022)
- Doroshenko, Victor, et al. 'Determination of X-ray pulsar geometry with IXPE polarimetry' Nature Astronomy (2022)
- Tsygankov, Sergey S., et al. 'The X-ray polarimetry view of the accreting pulsar Cen X-3' The Astrophysical Journal Letters (2022)
- Rink, Katherine, Ilaria Caiazzo, and Jeremy Heyl 'Testing general relativity using quasi-periodic oscillations from X-ray black holes: XTE J1550-564 and GRO J1655-40' Monthly Notices of the Royal Astronomical Society (2022)
- Marshall, H. L., et al. 'Observations of 4U 1626-67 with the Imaging X-Ray Polarimetry Explorer' The Astrophysical Journal (2022)
- Mousemi, Arash, et al. 'Application of machine learning in low-order manifold representation of chemistry in turbulent flames' Combustion Theory and Modelling (2022)
- Chen, Yige, et al. 'Yet Another Format of Universal Dependencies for Korean' arXiv (2022)
- Huet, Damien P., and Anthony Wachs 'A Cartesian-octree adaptive front-tracking solver for immersed biological capsules in large complex domains' arXiv (2022)
- Cho, Anna, et al. 'Monophyly of diverse Bigyromonadea and their impact on phylogenomic relationships within stramenopiles' Molecular Phylogenetics and Evolution (2022)
- Huang, Yangsibo, et al. 'A Dataset Auditing Method for Collaboratively Trained Machine Learning Models' IEEE Transactions on Medical Imaging (2022)
- Ayromlou, Sana, et al. 'Class Impression for Data-Free Incremental Learning' Medical Image Computing and Computer Assisted Intervention–MICCAI 2022 (2022)
- Yao, Ruichen, et al. 'Improving Fairness in Image Classification via Sketching' arXiv (2022)
- Maurya, Manoj Kumar, et al. 'Computational indentation in highly cross-linked polymer networks' Physical Review E (2022)
- Henry, Greg HR, et al. 'The International Tundra Experiment (ITEX): 30 years of research on tundra ecosystems' Arctic Science (2022)
- Hollister, Robert D., et al. 'A review of open top chamber (OTC) performance across the ITEX Network' Arctic Science (2022)
- Zhang, Congsong, Yong Gao, and James Nastos 'Learning Branching Heuristics from Graph Neural Networks' arXiv (2022)
- Saileshwar, Gururaj, et al. 'Randomized row-swap: mitigating Row Hammer by breaking spatial correlation between aggressor and victim rows' Proceedings of the 27th ACM International Conference on Architectural Support for Programming Languages and Operating Systems (2022)
- Adnan, Muhammad, et al. 'Heterogeneous Acceleration Pipeline for Recommendation System Training' arXiv (2022)
- Hoque, Md Asmaul, et al. 'Electrochemical PINOylation of Methylarenes: Improving the Scope and Utility of Benzylic Oxidation through Mediated Electrolysis' Journal of the American Chemical Society (2022)
- Straubinger, Tim, Robert Xiao, and Helge Rhodin 'Learned Acoustic Reconstruction using Synthetic Aperture Focusing' ICASSP 2022-2022 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) (2022)
- Surjanovic, Nikola, et al. 'Parallel Tempering With a Variational Reference' arXiv (2022)
- Saed, Mohammadreza, et al. 'Vulkan-Sim: A GPU Architecture Simulator for Ray Tracing' 55th IEEE/ACM International Symposium on Microarchitecture (2022)
- Cheng, Xuanjin et al. 'cSurvival: a web resource for biomarker interactions in cancer outcomes and in cell lines' Briefings in Bioinformatics (2022)
- Baptista, Luis A., et al. 'Stabilizing $\alpha-$ helicity of polypeptide in aqueous urea: Dipole orientation or hydrogen bonding?' arXiv (2022)
- Mukherji, Debashish, et al. 'Simple generic picture of toughness in solid polymer blends' arXiv (2022)
- Middei, Riccardo, et al. 'X-Ray Polarization Observations of BL Lacertae' The Astrophysical Journal Letters (2022)
- Mahdavi, Sadegh, et al. 'Towards Better Out-of-Distribution Generalization of Neural Algorithmic Reasoning Tasks' arXiv (2022)
- Grisel-Davy, Arthur, et al. 'Work-in-Progress: Boot Sequence Integrity Verification with Power Analysis' International Conference on Embedded Software (2022)
- Anjum, Taif, Beiyu Lin, and Apurva Narayan 'Leveraging spatio-temporal features to forecast time-to-accident' Proceedings of the 30th International Conference on Advances in Geographic Information Systems (2022)
- Tuca, Emilian, Gino DiLabio, and Alberto Otero-de-la-Roza 'Minimal Basis Set Hartree–Fock Corrected with Atom-Centered Potentials for Molecular Crystal Modeling and Crystal Structure Prediction' Journal of Chemical Information and Modeling (2022)
- Ren, Yi, et al. 'Effects of pH on Ice Nucleation by the α-Alumina (0001) Surface' The Journal of Physical Chemistry C (2022)
- Scheiber, H. O., and G. N. Patey 'Binary salt structure classification with convolutional neural networks: Application to crystal nucleation and melting point calculations' The Journal of Chemical Physics (2022)
- Yang, Wang, et al. 'Nonsymmorphic spin-space cubic groups and SU (2) conformal invariance in one-dimensional spin-1/2 models' arXiv (2022)
- Yang, Wang, et al. 'Counter-rotating spiral, zigzag, and 120$^\circ $ orders from coupled-chain analysis of Kitaev-Gamma-Heisenberg model, and relations to honeycomb iridates' arXiv (2022)
- Bin, Junchi, et al. 'Foreground Fusion-Based Liquefied Natural Gas Leak Detection Framework From Surveillance Thermal Imaging' IEEE Transactions on Emerging Topics in Computational Intelligence (2022)
- AmaniDashlejeh, Asghar, and Cristiano Loss 'Reliability-based design optimization of strengthened and reinforced glulam beams in bending' Wood Material Science & Engineering (2022)
- Sharma, Rishab, Fuxiang Chen, and Fatemeh Fard 'LAMNER: code comment generation using character language model and named entity recognition' Proceedings of the 30th IEEE/ACM International Conference on Program Comprehension (2022)
- Sharma, Rishab, et al. 'An exploratory study on code attention in BERT' Proceedings of the 30th IEEE/ACM International Conference on Program Comprehension (2022)
- Goel, Divyam, Ramansh Grover, and Fatemeh H. Fard 'On the cross-modal transfer from natural language to code through adapter modules' Proceedings of the 30th IEEE/ACM International Conference on Program Comprehension (2022)
- Chen, Fuxiang, et al. 'On the transferability of pre-trained language models for low-resource programming languages' Proceedings of the 30th IEEE/ACM International Conference on Program Comprehension (2022)
- Hadi, Mohammad Abdul, et al. 'On the effectiveness of pretrained models for API learning' Proceedings of the 30th IEEE/ACM International Conference on Program Comprehension (2022)
- Luong, Kien, et al. 'ARSeek: identifying API resource using code and discussion on stack overflow' Proceedings of the 30th IEEE/ACM International Conference on Program Comprehension (2022)
- Khajezade, Mohamad, Fatemeh Hendijani Fard, and Mohamed S. Shehata 'Evaluating few shot and Contrastive learning Methods for Code Clone Detection' arXiv (2022)
- Sharma, Rishab, et al. 'Self-admitted technical debt in R: detection and causes' Automated Software Engineering (2022)
- Khajezade, Mohamad, Fatemeh Hendijani Fard, and Mohamed S. Shehata 'Evaluating few shot and Contrastive learning Methods for Code Clone Detection' arXiv (2022)
- Sampara, Pranav, et al. 'Integrating Genome-Resolved Metagenomics with Trait-Based Process Modeling to Determine Biokinetics of Distinct Nitrifying Communities within Activated Sludge' Environmental Science & Technology (2022)
- Gagliano, Maria Cristina, et al. 'Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes' Applied and Environmental Microbiology (2022)
- Vyshenska, Dariia, et al. 'A standardized quantitative analysis strategy for stable isotope probing metagenomics' bioRxiv (2022)
- Dizjeh, Shahab Zeraati, and Joshua Brinkerhoff 'Numerical investigations of turbulent heat transfer enhancement in circular tubes via modified internal profiles' International Journal of Thermofluids (2022)
- Bruns, Daniel, et al. 'Comment on “Ultrahigh Convergent Thermal Conductivity of Carbon Nanotubes from Comprehensive Atomistic Modeling”' Physical Review Letters (2022)
- Woollard, Geoffrey, et al. 'Physics aware inference for the cryo-EM inverse problem: anisotropic network model heterogeneity, global pose and microscope defocus' NeurIPS Workshop on Machine Learning for Structural Biology (2022)
- Riahi, Aryan Tajmir, et al. '3D alignment of cryogenic electron microscopy density maps by minimizing their Wasserstein distance' Machine Learning in Structural Biology Workshop at the 37th Conference on Neural Information Processing Systems (2022)
- Ciocoiu, Ana, Mohammad Khalifa, and Joe Salfi 'Towards computer-assisted design of hole spin qubits in quantum dot devices' arXiv (2022)
- Zaji, Amirhossein, et al. 'Wheat spike localization and counting via hybrid UNet architectures' Computers and Electronics in Agriculture (2022)
- d'Eon, Greg, et al. 'The spotlight: A general method for discovering systematic errors in deep learning models' ACM Conference on Fairness, Accountability, and Transparency (2022)
- Jeffrey Boschman et al. 'The utility of color normalization for ai‐based diagnosis of hematoxylin and eosin‐stained pathology images' The Journal of Pathology (2022)
- Farahani, Hossein Farahani et al. 'Deep learning-based histotype diagnosis of ovarian carcinoma whole-slide pathology images' Modern Pathology (2022)
- Lisa P. Barrett et al. 'Links between personality traits and problem-solving performance in zebra finches (Taeniopygia guttata)' Royal Society Open Science (2022)
- Lauren A. Stanton et al. 'Environmental, individual and social traits of free-ranging raccoons influence performance in cognitive testing' Journal of Experimental Biology (2022)
- Nick PG Gauthier et al. 'Alterations in the nasopharyngeal microbiome associated with SARS-CoV-2 infection status and disease severity' PLoS One (2022)
- Bianca Patrizia Iulianella Phillips et al. 'DNA sequencing, microbial sensors, and the discovery of buried mineral resources' EarthArXiv (2022)
- Ahmad Rahmzadeh, Robert Tremblay, and M. Shahria Alam 'Finite-element simulation of the lateral response of posttensioned base rocking steel bridge piers' Journal of Structural Engineering (2022)
- Tadesse G. Wakjira et al. 'Explainable machine learning based efficient prediction tool for lateral cyclic response of post-tensioned base rocking steel bridge piers' Structures (2022)
- Ryan Stanley Falck et al. 'The independent associations of physical activity and sleep with neural activity during an inhibitory task: cross-sectional results from the MONITOR-OA study' Journal of Sleep Research (2022)
- Chun Liang Hsu et al. 'Objective Sleep Quality and the Underlying Functional Neural Correlates Among Older Adults with Possible Mild Cognitive Impairment' Journal of Alzheimer's Disease (2022)
- Ryan G. Stein et al. 'Physical Activity Level Moderates the Association Between Response Inhibition and Anterior Cingulate Cortex Volume in Older Adults' Alzheimer's & Dementia (2022)
- Mitchell Wiebe 'Deep learning applications for differential diagnosis of lung cancer : the effect of spatial resolution on classification of histopathology images' University of British Columbia (2022)
2021
- Hanna, Sharon, Jason Pither, and Mathew Vis-Dunbar 'Implementation of an open science instruction program for undergraduates' Data Intelligence (2021)
- Gonsalves, Jose 'Anderson-Type Mixing Methods for the Convergence Acceleration of Partitioned Fluid-Structure Interaction (FSI) Algorithms' APS Division of Fluid Dynamics Meeting Abstracts (2021)
- Belley, A., et al. 'Ab Initio Neutrinoless Double-Beta Decay Matrix Elements for Ca 48, Ge 76, and Se 82' Physical Review Letters (2021)
- Skinnider, Michael A., et al. 'PrInCE: an R/Bioconductor package for protein-protein interaction network inference from co-fractionation mass spectrometry data' Bioinformatics (2021)
- Stroberg, S. R., et al. 'Ab initio limits of atomic nuclei' Physical Review Letters (2021)
- Nocera, Alberto, et al. 'Bipolaron liquids at strong Peierls electron-phonon couplings' Physical Review B (2021)
- Rebain, Daniel, et al. 'Derf: Decomposed radiance fields' Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (2021)
- Prasad, Viki Kumar 'Development of atom-centered potentials for efficient and accurate electronic structure modeling of large molecular systems' University of British Columbia (2021)
- Richmond, Phillip A., et al. 'GeneBreaker: Variant simulation to improve the diagnosis of Mendelian rare genetic diseases' Human mutation (2021)
- Mukherji, Debashish, and Manjesh Kumar Singh 'Tuning thermal transport in highly cross-linked polymers by bond-induced void engineering' Physical Review Materials (2021)
- De Filippis, G., et al. 'Quantum phase transition of many interacting spins coupled to a bosonic bath: Static and dynamical properties' Physical Review B (2021)
- Renteria Ruiz, Alondra Perla 'Annular displacement flows in primary cementing of horizontal and irregular wellbores' University of British Columbia (2021)
- Gentile, Francesco, et al. 'Automated discovery of noncovalent inhibitors of SARS-CoV-2 main protease by consensus Deep Docking of 40 billion small molecules' Chemical Science (2021)
- Prasad, Viki Kumar, et al. 'BSE49, a diverse, high-quality benchmark dataset of separation energies of chemical bonds' Scientific Data (2021)
- Ripoche, Paul, and Jeremy Heyl 'Progress toward optimizing energy and arrival-time resolution with a transition-edge sensor from simulations of x-ray-photon events' Journal of Astronomical Telescopes, Instruments, and Systems (2021)
- Zavaleta, Rodrigo Chavez, et al. 'Effects of reduced dimensionality, crystal field, electron-lattice coupling, and strain on the ground state of a rare-earth nickelate monolayer' Physical Review B (2021)
- Huang, Kate, et al. 'The interplay between titin, polygenic risk, and modifiable cardiovascular risk factors in atrial fibrillation' Canadian Journal of Cardiology (2021)
- Zhang, Stephen Yimai 'Dynamical inference for biological processes through the lens of optimal transport' University of British Columbia (2021)
- Prasad, Viki Kumar, et al. 'BH9, a New Comprehensive Benchmark Data Set for Barrier Heights and Reaction Energies: Assessment of Density Functional Approximations and Basis Set Incompleteness Potentials' Journal of Chemical Theory and Computation (2021)
- Mougeot, M., et al. 'Mass measurements of 99-101In challenge ab initio nuclear theory of the nuclide 100Sn' Nature Physics (2021)
- Sun, Weiwei, et al. 'Canonical capsules: Self-supervised capsules in canonical pose' Advances in Neural Information Processing Systems (2021)
- Funes Rojas, David 'Dynamic recrystallization of nano/micro particles under high velocity impact' University of British Columbia (2021)
- Rebain, Daniel, et al. 'Deep medial fields' arXiv (2021)
- Cai, Yuecheng, and Jasmin Jelovica 'Adaptive Constraint Handling in Optimization of Complex Structures by Using Machine Learning' International Conference on Offshore Mechanics and Arctic Engineering (2021)
- Skinnider, Michael A., et al. 'Chemical language models enable navigation in sparsely populated chemical space' Nature Machine Intelligence (2021)
- Skinnider, Michael A., et al. 'Cell type prioritization in single-cell data' Nature Biotechnology (2021)
- Zhang, Ran, et al. 'WGGAN: A wavelet-guided generative adversarial network for thermal image translation' Generative Adversarial Networks for Image-to-Image Translation (2021)
- Haenel, Rafael, et al. 'Time-resolved optical conductivity and Higgs oscillations in two-band dirty superconductors' Physical Review B (2021)
- Li, Shaozhi, et al. 'Particle-hole asymmetry in the dynamical spin and charge responses of corner-shared 1D cuprates' Communications Physics (2021)
- Di Matteo, Olivia, et al. 'Improving Hamiltonian encodings with the Gray code' Physical Review A (2021)
- Yang, Wang, et al. 'Classical spin order near the antiferromagnetic Kitaev point in the spin-1 2 Kitaev-Gamma chain' Physical Review B (2021)
- Durney, Clinton H., and James J. Feng 'A three-dimensional vertex model for Drosophila salivary gland invagination' Physical Biology (2021)
- Prasad, Viki Kumar, Alberto Otero-de-la-Roza, and Gino A. DiLabio 'Performance of small basis set Hartree-Fock methods for modeling non-covalent interactions' Electronic Structure (2021)
- Hendy, Mohamed, Samuel Kaufman, and Mauricio Ponga 'Molecular strategies for antibody binding and escape of SARS-CoV-2 and its mutations' Scientific Reports (2021)
- Adnan, Muhammad, et al. 'Accelerating recommendation system training by leveraging popular choices' arXiv (2021)
- Orhan, Okan K., and Mauricio Ponga 'Surface-plasmon properties of noble metals with exotic phases' The Journal of Physical Chemistry C (2021)
- Skinnider, Michael A., et al. 'A deep generative model enables automated structure elucidation of novel psychoactive substances' Nature Machine Intelligence (2021)
- Angles, Baptiste, et al. 'MIST: Multiple Instance Spatial Transformer' Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (2021)
- Yan, Shengyu, and Jasmin Jelovica 'Buckling and free vibration of laser-welded web-core sandwich panels: Extreme sensitivity to variation of weld rotational stiffness' Engineering Structures (2021)
- Skinnider, Michael A., and Leonard J. Foster 'Meta-analysis defines principles for the design and analysis of co-fractionation mass spectrometry experiments' Nature Methods (2021)
- Skinnider, Michael A., et al. 'Chemical language models enable navigation in sparsely populated chemical space' Nature Machine Intelligence (2021)
- Kumar, Anand, Allan K. Bertram, and Grenfell N. Patey 'Molecular Simulations of Feldspar Surfaces Interacting with Aqueous Inorganic Solutions: Interfacial Water/Ion Structure and Implications for Ice Nucleation' ACS Earth and Space Chemistry (2021)
- Sarmadi, P., A. Renteria, and I. A. Frigaard 'Primary cementing of horizontal wells. Displacement flows in eccentric horizontal annuli. Part 2. Computations' Journal of Fluid Mechanics (2021)
- Skinnider, Michael A., et al. 'An atlas of protein-protein interactions across mouse tissues' Cell (2021)
- Renteria, Alondra, Parisa Sarmadi, and Ian Frigaard 'Cementing Irregular Horizontal Wellbores' International Conference on Offshore Mechanics and Arctic Engineering (2021)
- Jokiniemi, L., et al. 'Ab initio calculation of muon capture on 24Mg' arXiv (2021)
- Squair, Jordan W., et al. 'Confronting false discoveries in single-cell differential expression' Nature Communications (2021)
- Chizfahm, A., and R. Jaiman 'Deep learning for stability analysis of a freely vibrating sphere at moderate Reynolds number' arXiv (2021)
- Harvey, William, Saeid Naderiparizi, and Frank Wood 'Conditional Image Generation by Conditioning Variational Auto-Encoders' International Conference on Learning Representations (2021)
- Kashyap, Suraj R., and Rajeev K. Jaiman 'A robust and accurate finite element framework for cavitating flows with moving fluid-structure interfaces' Computers & Mathematics with Applications (2021)
- Soni, Abhishek, and G. N. Patey 'How Microscopic Features of Mineral Surfaces Critically Influence Heterogeneous Ice Nucleation' The Journal of Physical Chemistry C (2021)
- Gupta, Rachit, and Rajeev Jaiman 'Hybrid physics-based deep learning methodology for moving interface and fluid-structure interaction' arXiv (2021)
- Rojas, David Funes, Okan K. Orhan, and Mauricio Ponga 'Dynamic recrystallization of Silver nanocubes during high-velocity impacts' Acta Materialia (2021)
- Soni, Abhishek, and G. N. Patey 'Unraveling the Mechanism of Ice Nucleation by Mica (001) Surfaces' The Journal of Physical Chemistry C (2021)
- Chizfahm, Amir, and Rajeev Jaiman 'Data-driven stability analysis and near-wake jet control for the vortex-induced vibration of a sphere' Physics of Fluids (2021)
- Rath, Biswajeet, Xiaoyu Mao, and Rajeev Kumar Jaiman 'An Interface-Driven Adaptive Variational Procedure for Fully Eulerian Fluid-Structure Interaction via Phase-field Modeling' Available at SSRN 4047634 (2021)
- He, Xingzhe, Bastian Wandt, and Helge Rhodin 'Latentkeypointgan: Controlling gans via latent keypoints' arXiv (2021)
- Chizfahm, Amir, Vaibhav Joshi, and Rajeev Jaiman 'Transverse flow-induced vibrations of a sphere in the proximity of a free surface: A numerical study' Journal of Fluids and Structures (2021)
- Tseng, Yi 'Resonant Inelastic X-ray Scattering Studies of Low-Dimensional and Frustrated 3d Transition-Metal Oxides' Infoscience EPFL Scientific Publications (2021)
- Singla, Rohit, et al. 'Speckle and Shadows: Ultrasound-specific Physics-based Data Augmentation Applied to Kidney Segmentation' Proceedings of Machine Learning Research (2021)
- Skinnider, M.A., et al. 'Proteomic portraits of human and porcine spinal cord injury define cross-species biomarkers of injury severity and recovery' Molecular and Cellular Proteomics (2021)
- Asnaashari, Kasra, and R. V. Krems 'Gradient domain machine learning with composite kernels: improving the accuracy of PES and force fields for large molecules' Machine Learning: Science and Technology (2021)
- Sugisawa, Naoto, et al. 'Rapid and Mild One-Flow Synthetic Approach to Unsymmetrical Sulfamides Guided by Bayesian Optimization' Chemistry Methods (2021)
- Hou, B., and R. V. Krems 'Quantum transfer through small networks coupled to phonons: Effects of topology versus phonons' Physical Review E (2021)
- Vaden Masrani, Rob Brekelmans, Thang Bui, Frank Nielsen, Aram Galstyan, Greg Ver Steeg, Frank Wood 'Proceedings of the Thirty-Seventh Conference on Uncertainty in Artificial Intelligence' Proceedings of Machine Learning Research (2021)
- Shobeiri, Amin, and Mauricio Ponga 'A visco-inertial formulation for capillarity in irregular channels and tubes' Physics of Fluids (2021)
- Griesbach, Claire, et al. 'Origins of size effects in initially dislocation-free single-crystal silver micro-and nanocubes' Acta Materialia (2021)
- Su, Shih-Yang, et al. 'A-nerf: Surface-free human 3d pose refinement via neural rendering' arXiv (2021)
- Hemauer, J., et al. 'Particle rotation speeds up capillary interactions' The European Physical Journal E (2021)
- Qiu, Mingfeng, James J. Feng, and Jean-Christophe Loudet 'Phase-field model for elastocapillary flows of liquid crystals' Physical Review E (2021)
- Mukherji, Debashish, Tiago Espinosa de Oliveira, and Joerg Rottler 'Correlating thermodynamics, morphology, mechanics and thermal transport in PMMA-PLA blends' arXiv (2021)
- Pigard, Louis, et al. 'Microscopic Model to Quantify the Difference of Energy-Transfer Rates between Bonded and Nonbonded Monomers in Polymers' Macromolecules (2021)
- Chen, Chaojian, et al. 'Polymer cyclization for the emergence of hierarchical nanostructures' Nature Communications (2021)
- Gao, Hongyu, et al. 'Comparing simulated specific heat of liquid polymers and oligomers to experiments' Physical Review Materials (2021)
- Weaver, Dustin Steven, and Sanja Miškovic 'A Study of RANS Turbulence Models in Fully Turbulent Jets: A Perspective for CFD-DEM Simulations' Fluids (2021)
- Jiang, Wei, et al. 'Cotr: Correspondence transformer for matching across images' Proceedings of the IEEE/CVF International Conference on Computer Vision (2021)
- Riehl, Paul S., et al. 'Origin of enantioselectivity reversal in Lewis acid-catalysed Michael additions relying on the same chiral source' Chemical Science (2021)
- Mao, Xiaoyu, Vaibhav Joshi, and Rajeev Jaiman 'A variational interface-preserving and conservative phase-field method for the surface tension effect in two-phase flows' Journal of Computational Physics (2021)
- Bukka, Sandeep Reddy, et al. 'Assessment of unsteady flow predictions using hybrid deep learning based reduced-order models' Physics of Fluids (2021)
- Nagoudi, El Moatez Billah, AbdelRahim Elmadany, and Muhammad Abdul-Mageed 'AraT5: Text-to-Text Transformers for Arabic Language Understanding and Generation' arXiv (2021)
- Jawahar, Ganesh, et al. 'Exploring text-to-text transformers for english to hinglish machine translation with synthetic code-mixing' arXiv (2021)
- Adebara, Ife, and Muhammad Abdul-Mageed 'Improving Similar Language Translation With Transfer Learning' arXiv (2021)
- Adebara, Ife, Muhammad Abdul-Mageed, and Miikka Silfverberg 'Translating the unseen? yoruba-english mt in low-resource, morphologically-unmarked settings' arXiv (2021)
- Abdul-Mageed, Muhammad, et al. 'Nadi 2021: The second nuanced arabic dialect identification shared task' arXiv (2021)
- Nagoudi, El Moatez Billah, et al. 'Indt5: A text-to-text transformer for 10 indigenous languages' arXiv (2021)
- Hammond, Timothy G., et al. 'Cell spinpods are a simple inexpensive suspension culture device to deliver fluid shear stress to renal proximal tubular cells' Scientific Reports (2021)
- Soltani, Siavash, Chad W. Sinclair, and Jörg Rottler 'Exploring glassy dynamics with Markov state models from graph dynamical neural networks' Physical Review E (2021)
- Soltani, Siavash, Jörg Rottler, and Chad W. Sinclair 'Carbon diffusion in concentrated Fe–C glasses' Modelling and Simulation in Materials Science and Engineering (2021)
- Liu, Lufei, et al. 'Intersection prediction for accelerated GPU ray tracing' 54th Annual IEEE/ACM International Symposium on Microarchitecture (2021)
- Cheng, Xuanjin et al. 'eVITTA: a web-based visualization and inference toolbox for transcriptome analysis' Nucleic acids research (2021)
- Booker, Tom R., Sam Yeaman, and Michael C. Whitlock 'The WZA: A window-based method for characterizing genotype-environment association' bioRxiv (2021)
- Bruns, Daniel, et al. 'Nanotube heat conductors under tensile strain: Reducing the three-phonon scattering strength of acoustic phonons' Physical Review B (2021)
- Frei, Esther R., and Gregory HR Henry 'Long-term effects of snowmelt timing and climate warming on phenology, growth, and reproductive effort of Arctic tundra plant species' Arctic Science (2021)
- Panchen, Zoe A., Esther R. Frei, and Greg HR Henry 'Increased Arctic climate extremes constrain expected higher plant reproductive success in a warmer climate' Arctic Science (2021)
- Brynn A. McLellan and Kristen A. Walker 'Efficacy of motion-activated sprinklers as a humane deterrent for urban coyotes' Human Dimensions of Wildlife (2021)
- Ethan K. Gough et al. 'Maternal fecal microbiome predicts gestational age, birth weight and neonatal growth in rural Zimbabwe' EBioMedicine (2021)
2020
- Yang, Wang, et al. 'Phase diagram of the spin-1/2 Kitaev-Gamma chain and emergent SU (2) symmetry' Physical Review Letters (2020)
- Zhang, Xilin, et al. 'Ab initio calculations of low-energy nuclear scattering using confining potential traps' Physical Review Letters (2020)
- Doucette, Jonathan, Christian Kames, and Alexander Rauscher 'DECAES - DEcomposition and component analysis of exponential signals' Journal of Medical Physics (2020)
- Sadovnick, A. Dessa, et al. 'Canadian multiple sclerosis pregnancy study (CANPREG-MS): rationale and methodology' Canadian Journal of Neurological Sciences (2020)
- Ponga, Mauricio 'Quantifying the adhesive strength between the SARS-CoV-2 S-proteins and human receptor and its effect in therapeutics' Scientific Reports (2020)
- Bhardwaj, Aashish 'Influence of flexure and crowding on nanoscale thermal transport' University of British Columbia (2020)
- Miyagi, T., et al. 'Ab initio multishell valence-space Hamiltonians and the island of inversion' Physical Review C (2020)
- Whitmore, K., et al. 'Beta decay of In 132 and spectroscopy of Sn 132 and Sb 131 with the GRIFFIN spectrometer' Physical Review C (2020)
- Cortes, M. L., et al. 'N= 32 shell closure below calcium: Low-lying structure of Ar 50' Physical Review C (2020)
- Dolzhenko, Egor, et al. 'ExpansionHunter Denovo: a computational method for locating known and novel repeat expansions in short-read sequencing data' Genome biology (2020)
- Yang, Wang, et al. 'Spin-nematic order in the spin-1/2 Kitaev-Gamma chain' arXiv (2020)
- Heil, S., et al. 'Electromagnetic properties of 21O for benchmarking nuclear Hamiltonians' Physics Letters B (2020)
- Zawadzki, Krissia, Alberto Nocera, and Adrian E. Feiguin 'A time-dependent scattering approach to core-level spectroscopies' arXiv (2020)
- Kumar, Umesh, et al. 'Spectroscopic signatures of next-nearest-neighbor hopping in the charge and spin dynamics of doped one-dimensional antiferromagnets' Physical Review B (2020)
- Yang, Wang, Alberto Nocera, and Ian Affleck 'Spin wave theory of a one-dimensional generalized Kitaev model' Physical Review B (2020)
- Nocera, Alberto, et al. 'One-dimensional Peierls phase separation in the dilute carrier density limit' arXiv (2020)
- Samanipour, F., Jelovica, J. 'Adaptive repair method for constraint handling in multi-objective genetic algorithm based on the relationship between constraints and variables' Applied Soft Computing (2020)
- Abdul-Mageed, Muhammad, et al. 'Toward micro-dialect identification in diaglossic and code-switched environments' arXiv (2020)
- Jawahar, Ganesh, Muhammad Abdul-Mageed, and Laks VS Lakshmanan 'Automatic detection of machine-generated text: A critical survey' arXiv (2020)
- Nagoudi, El Moatez Billah, et al. 'Machine generation and detection of Arabic manipulated and fake news' arXiv (2020)
- Abdul-Mageed, Muhammad, AbdelRahim Elmadany, and El Moatez Billah Nagoudi 'ARBERT & MARBERT: deep bidirectional transformers for Arabic' arXiv (2020)
- Chizfahm, A., V. Joshi, and R. K. Jaiman 'Vortex-induced vibration of a spherical body with free surface effects: Application to tugboats with low length-to-beam ratio' International Conference on Offshore Mechanics and Arctic Engineering (2020)
- Heyl, Jeremy, Ilaria Caiazzo, and Denis González-Caniulef 'X-ray Polarization at the Crossroads' Proceedings of the International Astronomical Union (2020)
- González-Caniulef, Denis, Ilaria Caiazzo, and Jeremy Heyl 'IXPE Simulations for magnetars' Proceedings of the International Astronomical Union (2020)
- Kırmızıbayrak, Demet, and Jeremy Heyl 'Probing Magnetars Using Spectral Lines with Future Telescopes' Proceedings of the International Astronomical Union (2020)
- Doucette, Jonathan, Christian Kames, and Alexander Rauscher 'DECAES–DEcomposition and component analysis of exponential signals' Journal of Medical Physics (2020)
2016-2019
- Barsky, Eugene, et al. 'UBC Research Data Management Survey: Humanities and Social Sciences' University of British Columbia (2019)
- El Khatib, Randa, Alyssa Arbuckle, and Ray Siemens 'Foundations for on-campus open social scholarship activities' Knowledge Creation, Dissemination, and Preservation Studies (2019)
- Samanipour, F., and J. Jelovica 'Improving multi-objective structural optimization with a novel constraint-handling method' Trends in the Analysis and Design of Marine Structures (2019)
- Froese Fischer, Charlotte, and Gediminas Gaigalas 'The Effect of Correlation on Spectra of the Lanthanides: Pr3+' Atoms (2018)
- Dombrowski, Quinn, et al. 'Research Computing's Demand for Humanists, and Vice Versa' Alliance of Digital Humanities Organizations (2017)
- Barsky, Eugene, et al. 'UBC Research Data Management Survey, UBC: Humanities and Social Sciences: Report' University of British Columbia (2017)
- Dombrowski, Quinn, et al. 'High-Performance Computing for Photogrammetry and OCR Made Easy' Alliance of Digital Humanities Organizations (2017)
- Bezabeh, M. A., et al. 'Seismic base shear modification factors for timber-steel hybrid structure: collapse risk assessment approach' Journal of Structural Engineering (2017)
- Barsky, Eugene, et al. 'UBC Research Data Management Survey: Health Sciences: Report' University of British Columbia (2017)
- Hahn, Aria S., et al. 'A geographically-diverse collection of 418 human gut microbiome pathway genome databases' Nature: Scientific Data (2017)
- Barsky, Eugene 'Three UBC Research Data Management (RDM) surveys: Science and engineering, humanities and social sciences, and health sciences: summary report' University of British Columbia (2017)
- Qin, Jian, Kevin Crowston, and Arden Kirkland. 'Pursuing best performance in research data management by using the capability maturity model and rubrics' Journal of eScience Librarianship (2017)
- Funnell, Tyler, et al. 'CLK-dependent exon recognition and conjoined gene formation revealed with a novel small molecule inhibitor ' Nature Communications (2017)
- Addison, G. E., et al. 'Quantifying discordance in the 2015 Planck CMB spectrum' The Astrophysical Journal (2016)